CodonO web service readme file for home_directory The "CU" program version 2.0 compute the Synonymous Codon Usage Order (SCUO) for the input sequences. The SCUO measures the codon usage bias and it is fit for codon usage comparison within and across genome. ============================================================================================= It was written by Xiufeng Wan, Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 and later updated by Shafquat B. Bhuiyan, Computer Science Department, University of Missouri-Columbia. This program is free software. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Any bug should refer to Xiufeng Wan by e-mail: wanx@muohio.edu. ============================================================================================= This directory should be the home directory of CodonO web service. ============================================================================================= This directory should contain the following files PHP files: index.php, download.php, orgSubmit.php, sendLink.php, viewResult.php, papers.php, sendResult.php, footer.php, submit.php, JScript.php, contact.php Binaries: CodonO HTML files: codono.css, defGeneticCode.html, defOrganism.html, defSeqFile.html, defTaxonomic.html, defUploadFile.html Images: tr.gif, bg3.gif, codono3.ico, favicon.ico, br.gif, codono.ico, bl2.gif, tl2.gif Directories: data, publication, downloads